
Associate Professor
Neurology
+1 415 502-2572
Jingjing Li, PhD researches large-scale analysis of disease genomes by integrating multi-omics data, evolutionary insights, electronic health records, as well as digitized clinical traits from imaging and wearable sensor readouts.
Publications
A Genome-Wide Analysis of Clinical Chorioamnionitis among Preterm Infants.
American journal of perinatology
The contributions of genetics to premature birth.
Pediatric research
Understanding health disparities.
Journal of perinatology : official journal of the California Perinatal Association
Natural Selection Has Differentiated the Progesterone Receptor among Human Populations.
American journal of human genetics
Fetal de novo mutations and preterm birth.
PLoS genetics
The genetic predisposition to bronchopulmonary dysplasia.
Current opinion in pediatrics
Exome Sequencing of Neonatal Blood Spots and the Identification of Genes Implicated in Bronchopulmonary Dysplasia.
American journal of respiratory and critical care medicine
Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.
Molecular systems biology
Identifying mRNA sequence elements for target recognition by human Argonaute proteins.
Genome research
Extensive variation in chromatin states across humans.
Science (New York, N.Y.)
SH3 interactome conserves general function over specific form.
Molecular systems biology
miRNA regulatory variation in human evolution.
Trends in genetics : TIG
Evidence for positive selection on a number of MicroRNA regulatory interactions during recent human evolution.
PLoS genetics
PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae.
Nucleic acids research
Systematic exploration of essential yeast gene function with temperature-sensitive mutants.
Nature biotechnology
Gene expression variability within and between human populations and implications toward disease susceptibility.
PLoS computational biology
Exploiting the determinants of stochastic gene expression in Saccharomyces cerevisiae for genome-wide prediction of expression noise.
Proceedings of the National Academy of Sciences of the United States of America
Revisiting the contribution of cis-elements to expression divergence between duplicated genes: the role of chromatin structure.
Molecular biology and evolution
Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis.
The Journal of cell biology
A probabilistic framework to improve microrna target prediction by incorporating proteomics data.
Journal of bioinformatics and computational biology
Evolution of an X-linked primate-specific micro RNA cluster.
Molecular biology and evolution
Learned random-walk kernels and empirical-map kernels for protein sequence classification.
Journal of computational biology : a journal of computational molecular cell biology
Identifying protein-protein interfacial residues in heterocomplexes using residue conservation scores.
International journal of biological macromolecules
Network analysis of the protein chain tertiary structures of heterocomplexes.
Protein and peptide letters
Predicting protein interaction sites from residue spatial sequence profile and evolution rate.
FEBS letters
Characterizing human gene splice sites using evolved regular expressions
Proceedings of IEEE International Joint Conference on Neural Networks