
Professor
Diabetes Center
+1 415 502-8052
Mark Anderson, MD, PhD is the Director of the Diabetes Center. He studies immune tolerance and the role of the thymus in type 1 diabetes and autoimmune disease.
Publications
Associations between immune checkpoint inhibitor response, immune-related adverse events, and steroid use in RADIOHEAD: a prospective pan-tumor cohort study.
Journal for immunotherapy of cancer
Checkpoint Inhibitor-Induced Autoimmune Diabetes: An Autoinflammatory Disease.
Cold Spring Harbor perspectives in medicine
Anti-perilipin-1 autoantibodies in autoimmune Addison's disease and related endocrine disorders.
Autoimmunity
Nr4a1 and Nr4a3 redundantly control clonal deletion and contribute to an anergy-like transcriptome in auto-reactive thymocytes to impose tolerance in mice.
Nature communications
Early expansion of TIGIT+PD1+ effector memory CD4 T cells via agonistic effect of alefacept in new-onset type 1 diabetes.
Journal of immunology (Baltimore, Md. : 1950)
Monogenic Type 1 Diabetes: A High Yield Pool in Which to Discover New Mechanisms and Candidate Therapeutics for Type 1 Diabetes.
Cold Spring Harbor perspectives in medicine
Altered Purinergic Signaling and CD8+ T Cell Dysregulation in STAT3 GOF Syndrome.
bioRxiv : the preprint server for biology
Incontinentia pigmenti underlies thymic dysplasia, autoantibodies to type I IFNs, and viral diseases.
The Journal of experimental medicine
Partial Lipodystrophy Affecting the Extremities in a Young Woman With Autoimmune Polyglandular Syndrome 1.
JCEM case reports
A balancing act in the control of self-antigen expression.
Nature immunology
Impact on in-depth immunophenotyping of delay to peripheral blood processing.
Clinical and experimental immunology
Phage Immunoprecipitation-Sequencing Reveals CDHR5 Autoantibodies in Select Patients With Interstitial Lung Disease.
ACR open rheumatology
Transcobalamin receptor antibodies in autoimmune vitamin B12 central deficiency.
Science translational medicine
Aire in Autoimmunity.
Annual review of immunology
The Role of Interferon-? in Autoimmune Polyendocrine Syndrome Type 1.
The New England journal of medicine
Unveiling the proteome-wide autoreactome enables enhanced evaluation of emerging CAR-T therapies in autoimmunity.
The Journal of clinical investigation
Aire mediates tolerance to insulin through thymic trimming of high-affinity T cell clones.
Proceedings of the National Academy of Sciences of the United States of America
De novo identification of CD4+ T cell epitopes.
Nature methods
Human inherited PD-L1 deficiency is clinically and immunologically less severe than PD-1 deficiency.
The Journal of experimental medicine
Rare neutralizing IFN-γ autoantibodies in HLA-DRB1* 15:02 or 16:02 individuals confer susceptibility to mycobacterial infections.
The Journal of clinical investigation
Ehf and Fezf2 regulate late medullary thymic epithelial cell and thymic tuft cell development.
Frontiers in immunology
Tracking the role of Aire in immune tolerance to the eye with a TCR transgenic mouse model.
Proceedings of the National Academy of Sciences of the United States of America
Vaccine breakthrough hypoxemic COVID-19 pneumonia in patients with auto-Abs neutralizing type I IFNs.
Science immunology
Unveiling the autoreactome: Proteome-wide immunological fingerprints reveal the promise of plasma cell depleting therapy.
medRxiv : the preprint server for health sciences
Validation of a murine proteome-wide phage display library for identification of autoantibody specificities.
JCI insight
Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance.
Science immunology
Immunosuppression causes dynamic changes in expression QTLs in psoriatic skin.
Nature communications
T cell deletional tolerance restricts AQP4 but not MOG CNS autoimmunity.
Proceedings of the National Academy of Sciences of the United States of America
Autoantigen profiling reveals a shared post-COVID signature in fully recovered and long COVID patients.
JCI insight
ABCC8-Related Monogenic Diabetes Presenting Like Type 1 Diabetes in an Adolescent.
AACE clinical case reports
Validation of a murine proteome-wide phage display library for the identification of autoantibody specificities.
bioRxiv : the preprint server for biology
Case report: Discovery of a de novo FAM111B pathogenic variant in a patient with an APECED-like clinical phenotype.
Frontiers in immunology
Autoantigen profiling reveals a shared post-COVID signature in fully recovered and Long COVID patients.
medRxiv : the preprint server for health sciences
Unlocking life-threatening COVID-19 through two types of inborn errors of type I IFNs.
The Journal of clinical investigation
Prevalence of type-1 interferon autoantibodies in adults with non-COVID-19 acute respiratory failure.
Respiratory research
Publisher Correction: A ROR?t+ cell instructs gut microbiota-specific Treg cell differentiation.
Nature
The risk of COVID-19 death is much greater and age dependent with type I IFN autoantibodies.
Proceedings of the National Academy of Sciences of the United States of America
Autoantibody discovery across monogenic, acquired, and COVID19-associated autoimmunity with scalable PhIP-Seq.
bioRxiv : the preprint server for biology
Modeling human T1D-associated autoimmune processes.
Molecular metabolism
Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium.
Science immunology
Response to Comments on "Aberrant type 1 immunity drives susceptibility to mucosal fungal infections".
Science (New York, N.Y.)
Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19.
Science translational medicine
Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths.
Science immunology
Extrathymic Aire-expressing cells support maternal-fetal tolerance.
Science immunology
Preexisting autoantibodies to type I IFNs underlie critical COVID-19 pneumonia in patients with APS-1.
The Journal of experimental medicine
Diabetes With Multiple Autoimmune and Inflammatory Conditions Linked to an Activating SKAP2 Mutation.
Diabetes care
A human mutation in STAT3 promotes type 1 diabetes through a defect in CD8+ T cell tolerance.
The Journal of experimental medicine
Neutralizing Autoantibodies to Type I Interferons in COVID-19 Convalescent Donor Plasma.
Journal of clinical immunology
Single-cell transcriptome analysis defines heterogeneity of the murine pancreatic ductal tree.
eLife
Longitudinal single-cell epitope and RNA-sequencing reveals the immunological impact of type 1 interferon autoantibodies in critical COVID-19.
bioRxiv : the preprint server for biology
Single-cell transcriptional profiling of human thymic stroma uncovers novel cellular heterogeneity in the thymic medulla.
Nature communications
Aberrant type 1 immunity drives susceptibility to mucosal fungal infections.
Science (New York, N.Y.)
More on STAT1 Gain of Function, Type 1 Diabetes, and JAK Inhibition. Reply.
The New England journal of medicine
Celebrating 20 years of FOCIS.
Science immunology
STAT1 Gain of Function, Type 1 Diabetes, and Reversal with JAK Inhibition.
The New England journal of medicine
Autoantibodies against type I IFNs in patients with life-threatening COVID-19.
Science (New York, N.Y.)
Inborn errors of type I IFN immunity in patients with life-threatening COVID-19.
Science (New York, N.Y.)
Tolerance in the Age of Immunotherapy.
The New England journal of medicine
Autoimmune Endocrinopathies: An Emerging Complication of Immune Checkpoint Inhibitors.
Annual review of medicine
Evaluation of SARS-CoV-2 serology assays reveals a range of test performance.
Nature biotechnology
High-resolution epitope mapping of anti-Hu and anti-Yo autoimmunity by programmable phage display.
Brain communications
Test performance evaluation of SARS-CoV-2 serological assays.
medRxiv : the preprint server for health sciences
GILT in Thymic Epithelial Cells Facilitates Central CD4 T Cell Tolerance to a Tissue-Restricted, Melanoma-Associated Self-Antigen.
Journal of immunology (Baltimore, Md. : 1950)
The Molecular Medicine Investigation Unit: Linking Patient Care and Scientific Inquiry in Physician-Scientist Training.
Journal of graduate medical education
New Frontiers in the Treatment of Type 1 Diabetes.
Cell metabolism
Introducing the Endotype Concept to Address the Challenge of Disease Heterogeneity in Type 1 Diabetes.
Diabetes care
Elastase 3B mutation links to familial pancreatitis with diabetes and pancreatic adenocarcinoma.
The Journal of clinical investigation
The epigenetic regulator ATF7ip inhibits Il2 expression, regulating Th17 responses.
The Journal of experimental medicine
Pulling RANK on Cancer: Blocking Aire-Mediated Central Tolerance to Enhance Immunotherapy.
Cancer immunology research
The autoimmune targets in IPEX are dominated by gut epithelial proteins.
The Journal of allergy and clinical immunology
A large CRISPR-induced bystander mutation causes immune dysregulation.
Communications biology
Maturing Human CD127+ CCR7+ PDL1+ Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens.
Frontiers in immunology
Thymic regulatory T cells arise via two distinct developmental programs.
Nature immunology
Author Correction: Discovery of stimulation-responsive immune enhancers with CRISPR activation.
Nature
Autoimmune Polyendocrine Syndromes.
The New England journal of medicine
Thymic tolerance as a key brake on autoimmunity.
Nature immunology
Revealing the specificity of regulatory T cells in murine autoimmune diabetes.
Proceedings of the National Academy of Sciences of the United States of America
Autoimmune Polyendocrine Syndromes.
The New England journal of medicine
Age-Associated Decline in Thymic B Cell Expression of Aire and Aire-Dependent Self-Antigens.
Cell reports
Erratum to: Understanding and preventing type 1 diabetes through the unique working model of TrialNet.
Diabetologia
Dominant-negative loss of function arises from a second, more frequent variant within the SAND domain of autoimmune regulator (AIRE).
Journal of autoimmunity
Insights into immune tolerance from AIRE deficiency.
Current opinion in immunology
Combination central tolerance and peripheral checkpoint blockade unleashes antimelanoma immunity.
JCI insight
Understanding and preventing type 1 diabetes through the unique working model of TrialNet.
Diabetologia
Exome Sequencing Reveals Mutations in AIRE as a Cause of Isolated Hypoparathyroidism.
The Journal of clinical endocrinology and metabolism
The influence of genetic predisposition and autoimmune hepatitis inducing antigens in disease development.
Journal of autoimmunity
Tolerance checkpoint bypass permits emergence of pathogenic T cells to neuromyelitis optica autoantigen aquaporin-4.
Proceedings of the National Academy of Sciences of the United States of America
LYN- and AIRE-mediated tolerance checkpoint defects synergize to trigger organ-specific autoimmunity.
The Journal of clinical investigation
AIRE expands: new roles in immune tolerance and beyond.
Nature reviews. Immunology
Proteome-wide survey of the autoimmune target repertoire in autoimmune polyendocrine syndrome type 1.
Scientific reports
Tolerance is established in polyclonal CD4(+) T cells by distinct mechanisms, according to self-peptide expression patterns.
Nature immunology
Identification of a novel cis-regulatory element essential for immune tolerance.
The Journal of experimental medicine
Central tolerance to self revealed by the autoimmune regulator.
Annals of the New York Academy of Sciences
Editorial overview: Autoimmunity.
Current opinion in immunology
Brd4 bridges the transcriptional regulators, Aire and P-TEFb, to promote elongation of peripheral-tissue antigen transcripts in thymic stromal cells.
Proceedings of the National Academy of Sciences of the United States of America
Transglutaminase 4 as a prostate autoantigen in male subfertility.
Science translational medicine
COPA mutations impair ER-Golgi transport and cause hereditary autoimmune-mediated lung disease and arthritis.
Nature genetics
Autoimmune hepatitis in a murine autoimmune polyendocrine syndrome type 1 model is directed against multiple autoantigens.
Hepatology (Baltimore, Md.)
Too much of a good thing: NLRC4 and autoinflammation.
The Journal of experimental medicine
Breaking through the central tolerance ceiling to unleash anticancer immune responses.
Oncoimmunology
Enhancement of an anti-tumor immune response by transient blockade of central T cell tolerance.
The Journal of experimental medicine
Spontaneous development of autoimmune uveitis Is CCR2 dependent.
The American journal of pathology
Panostotic expansile bone disease with massive jaw tumor formation and a novel mutation in the signal peptide of RANK.
Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research
Canonical microRNAs in thymic epithelial cells promote central tolerance.
European journal of immunology
The transcriptional regulator Aire coopts the repressive ATF7ip-MBD1 complex for the induction of immunotolerance.
Nature immunology
Protein microarray analysis reveals BAFF-binding autoantibodies in systemic lupus erythematosus.
The Journal of clinical investigation
Pathogenic CD4? T cells recognizing an unstable peptide of insulin are directly recruited into islets bypassing local lymph nodes.
The Journal of experimental medicine
BPIFB1 is a lung-specific autoantigen associated with interstitial lung disease.
Science translational medicine
Lineage tracing and cell ablation identify a post-Aire-expressing thymic epithelial cell population.
Cell reports
Insights into type 1 diabetes from the autoimmune polyendocrine syndromes.
Current opinion in endocrinology, diabetes, and obesity
Generation of functional thymic epithelium from human embryonic stem cells that supports host T cell development.
Cell stem cell
Autoimmune retinopathy in a patient with autoimmune polyendocrine syndrome type I.
Ocular immunology and inflammation
Detection of an autoreactive T-cell population within the polyclonal repertoire that undergoes distinct autoimmune regulator (Aire)-mediated selection.
Proceedings of the National Academy of Sciences of the United States of America
Defective autoimmune regulator-dependent central tolerance to myelin protein zero is linked to autoimmune peripheral neuropathy.
Journal of immunology (Baltimore, Md. : 1950)
Monogenic autoimmunity.
Annual review of immunology
Autoimmunity's collateral damage: Immunodeficiency hints at autoreactivity to cytokines.
Nature medicine
Control of central and peripheral tolerance by Aire.
Immunological reviews
Myocarditis: a defect in central immune tolerance?
The Journal of clinical investigation
Aire and T cell development.
Current opinion in immunology
The role of Aire in clonal selection.
Immunology and cell biology
Clues to immune tolerance: the monogenic autoimmune syndromes.
Annals of the New York Academy of Sciences
An autoimmune response to odorant binding protein 1a is associated with dry eye in the Aire-deficient mouse.
Journal of immunology (Baltimore, Md. : 1950)
Acquired autoimmune polyglandular syndrome, thymoma, and an AIRE defect.
The New England journal of medicine
Identification of an autoantigen demonstrates a link between interstitial lung disease and a defect in central tolerance.
Science translational medicine
AIRE in the thymus and beyond.
Current opinion in immunology
The sickness unto Deaf.
Nature immunology
An aberrant prostate antigen-specific immune response causes prostatitis in mice and is associated with chronic prostatitis in humans.
The Journal of clinical investigation
Monogenic autoimmune diseases: insights into self-tolerance.
Pediatric research
A novel myelin P0-specific T cell receptor transgenic mouse develops a fulminant autoimmune peripheral neuropathy.
The Journal of experimental medicine
The role of X-linked FOXP3 in the autoimmune susceptibility of Turner Syndrome patients.
Clinical immunology (Orlando, Fla.)
Update in endocrine autoimmunity.
The Journal of clinical endocrinology and metabolism
Effector mechanisms of the autoimmune syndrome in the murine model of autoimmune polyglandular syndrome type 1.
Journal of immunology (Baltimore, Md. : 1950)
Selective miRNA disruption in T reg cells leads to uncontrolled autoimmunity.
The Journal of experimental medicine
Deletional tolerance mediated by extrathymic Aire-expressing cells.
Science (New York, N.Y.)
Mechanisms of an autoimmunity syndrome in mice caused by a dominant mutation in Aire.
The Journal of clinical investigation
Expression of Aire and the early wave of apoptosis in spermatogenesis.
Journal of immunology (Baltimore, Md. : 1950)
Small proline-rich protein 1B (SPRR1B) is a biomarker for squamous metaplasia in dry eye disease.
Investigative ophthalmology & visual science
A robust immunoassay for anti-interferon autoantibodies that is highly specific for patients with autoimmune polyglandular syndrome type 1.
Clinical immunology (Orlando, Fla.)
What's new in the Aire?
Trends in immunology
Lessons on immune tolerance from the monogenic disease APS1.
Current opinion in genetics & development
Spontaneous autoimmunity prevented by thymic expression of a single self-antigen.
The Journal of experimental medicine
Modifier loci condition autoimmunity provoked by Aire deficiency.
The Journal of experimental medicine
The NOD mouse: a model of immune dysregulation.
Annual review of immunology
Aire: an update.
Current opinion in immunology
Autoimmune endocrine disease.
Current opinion in immunology
Projection of an immunological self shadow within the thymus by the aire protein.
Science (New York, N.Y.)
Enhanced antigen presentation in the absence of the invariant chain endosomal localization signal.
The Journal of experimental medicine
Invariant chain can function as a chaperone protein for class II major histocompatibility complex molecules.
Proceedings of the National Academy of Sciences of the United States of America